[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 97 items for (author: voge & j)

EMDB-18963:
Structure of the SFTSV L protein in a transcription-priming state without capped RNA [TRANSCRIPTION-PRIMING (in vitro)]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Busch C, Milewski M, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

EMDB-18967:
Structure of the SFTSV L protein in a transcription-priming state with bound capped RNA [TRANSCRIPTION-PRIMING]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Busch C, Milewski M, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

EMDB-18969:
Structure of the SFTSV L protein stalled in a transcription-specific early elongation state with bound capped RNA [TRANSCRIPTION-EARLY-ELONGATION]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Busch C, Milewski M, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

PDB-8r6u:
Structure of the SFTSV L protein in a transcription-priming state without capped RNA [TRANSCRIPTION-PRIMING (in vitro)]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Busch C, Milewski M, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

PDB-8r6w:
Structure of the SFTSV L protein in a transcription-priming state with bound capped RNA [TRANSCRIPTION-PRIMING]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Busch C, Milewski M, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

PDB-8r6y:
Structure of the SFTSV L protein stalled in a transcription-specific early elongation state with bound capped RNA [TRANSCRIPTION-EARLY-ELONGATION]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Busch C, Milewski M, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

EMDB-16566:
70S-PHIKZ014 PHIKZ phage protein occupied ribosome
Method: single particle / : Gerovac M, Vogel J

PDB-8cd1:
70S-PHIKZ014
Method: single particle / : Gerovac M, Vogel J

EMDB-16670:
Structure of the SNV L protein bound to 5' RNA
Method: single particle / : Meier K, Thorkelsson SR, Durieux Trouilleton Q, Vogel D, Yu D, Kosinski J, Cusack S, Malet H, Grunewald K, Quemin ERJ, Rosenthal M

PDB-8ci5:
Structure of the SNV L protein bound to 5' RNA
Method: single particle / : Meier K, Thorkelsson SR, Durieux Trouilleton Q, Vogel D, Yu D, Kosinski J, Cusack S, Malet H, Grunewald K, Quemin ERJ, Rosenthal M

EMDB-34202:
AK-42 inhibitor binding human ClC-2 TMD
Method: single particle / : Wang L

EMDB-25427:
Structure of KRAS G12V/HLA-A*03:01 in complex with antibody fragment V2
Method: single particle / : Wright KM, Gabelli SB

PDB-7stf:
Structure of KRAS G12V/HLA-A*03:01 in complex with antibody fragment V2
Method: single particle / : Wright KM, Gabelli SB, Miller M

EMDB-33223:
TMD masked refine map of human ClC-2
Method: single particle / : Wang L

EMDB-33169:
Full length human CLC-2 channel in apo state
Method: single particle / : Wang L

EMDB-33276:
Cryo-EM structure of human pannexin 2
Method: single particle / : Hang Z, Huawei Z, Daping W

EMDB-15607:
Structure of the SFTSV L protein bound to 5' cRNA hook [5' HOOK]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Milewski M, Busch C, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

EMDB-15608:
Structure of the SFTSV L protein stalled at early elongation [EARLY-ELONGATION]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Milewski M, Busch C, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

EMDB-15610:
Structure of the SFTSV L protein stalled at early elongation with the endonuclease domain in a raised conformation [EARLY-ELONGATION-ENDO]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Milewski M, Busch C, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

EMDB-15614:
Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Milewski M, Busch C, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

EMDB-15615:
Structure of the SFTSV L protein bound in a resting state [RESTING]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Milewski M, Busch C, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

PDB-8as6:
Structure of the SFTSV L protein bound to 5' cRNA hook [5' HOOK]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Milewski M, Busch C, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

PDB-8as7:
Structure of the SFTSV L protein stalled at early elongation [EARLY-ELONGATION]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Milewski M, Busch C, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

PDB-8asb:
Structure of the SFTSV L protein stalled at early elongation with the endonuclease domain in a raised conformation [EARLY-ELONGATION-ENDO]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Milewski M, Busch C, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

PDB-8asd:
Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Milewski M, Busch C, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

PDB-8asg:
Structure of the SFTSV L protein bound in a resting state [RESTING]
Method: single particle / : Williams HM, Thorkelsson SR, Vogel D, Milewski M, Busch C, Cusack S, Grunewald K, Quemin ERJ, Rosenthal M

EMDB-14726:
Cryo-EM structure of ex vivo AA amyloid from renal tissue of a short hair cat deceased in a shelter
Method: helical / : Schulte T, Chaves-Sanjuan A, Ricagno S

PDB-7zh7:
Cryo-EM structure of ex vivo AA amyloid from renal tissue of a short hair cat deceased in a shelter
Method: helical / : Schulte T, Chaves-Sanjuan A, Ricagno S

EMDB-26507:
SARS-CoV-2 spike in complex with Multivalent miniprotein inhibitor FUS231-P24 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26508:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS231-P24 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26509:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26510:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26511:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26512:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-12590:
Bacteriophage YerA41 head icosahedral reconstruction
Method: single particle / : Gomez-Raya-Vilanova MV, Leskinen K, Bhattacharjee A, Virta P, Rosenqvist P, Smith JLR, Bayfield OW, Homberger C, Kerrinnes T, Voge J, Pajunen MI, Skurnik M

EMDB-12807:
Apo-structure of Lassa virus L protein (well-resolved polymerase core) [APO-CORE]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

EMDB-12860:
Apo-structure of Lassa virus L protein (well-resolved endonuclease) [APO-ENDO]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

EMDB-12861:
Apo-structure of Lassa virus L protein (well-resolved alpha ribbon) [APO-RIBBON]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, Williams H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

EMDB-12862:
Lassa virus L protein bound to 3' promoter RNA (well-resolved polymerase core) [3END-CORE]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

EMDB-12863:
Lassa virus L protein bound to 3' promoter RNA (well-resolved endonuclease) [3END-ENDO]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

EMDB-12953:
Lassa virus L protein with endonuclease and C-terminal domains in close proximity [MID-LINK]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

EMDB-12954:
Lassa virus L protein bound to the distal promoter duplex [DISTAL-PROMOTER]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

EMDB-12955:
Lassa virus L protein in a pre-initiation conformation [PREINITIATION]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

EMDB-12956:
Lassa virus L protein in an elongation conformation [ELONGATION]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

PDB-7och:
Apo-structure of Lassa virus L protein (well-resolved polymerase core) [APO-CORE]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

PDB-7oe3:
Apo-structure of Lassa virus L protein (well-resolved endonuclease) [APO-ENDO]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

PDB-7oe7:
Apo-structure of Lassa virus L protein (well-resolved alpha ribbon) [APO-RIBBON]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, Williams H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

PDB-7oea:
Lassa virus L protein bound to 3' promoter RNA (well-resolved polymerase core) [3END-CORE]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

PDB-7oeb:
Lassa virus L protein bound to 3' promoter RNA (well-resolved endonuclease) [3END-ENDO]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

PDB-7ojj:
Lassa virus L protein with endonuclease and C-terminal domains in close proximity [MID-LINK]
Method: single particle / : Kouba T, Vogel D, Thorkelsson S, Quemin E, William H, Milewski M, Busch C, Gunther S, Grunewald K, Rosenthal M, Cusack S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more